{
  "_id": "6a587cbeff0138dec5d741f4",
  "Package": "CMGFM",
  "Type": "Package",
  "Title": "Interpretable Multi-Omics Representation Learning via\nCovariate-Augumented Generalized Factor Model",
  "Version": "1.1",
  "Date": "2024-06-21",
  "Authors@R": "c(person(given = \"Wei\",\nfamily = \"Liu\",\nrole = c(\"aut\", \"cre\"),\nemail = \"LiuWeideng@gmail.com\"),\nperson(given = \"Jiakun\",\nfamily = \"Jiang\",\nrole = \"aut\"),\nperson(given = \"Dewei\",\nfamily = \"Xiang\",\nrole = \"aut\"),\nperson(given = \"Xuancheng\",\nfamily = \"Zhou\",\nrole = \"aut\"))",
  "Author": "Wei Liu [aut, cre], Jiakun Jiang [aut], Dewei Xiang [aut],\nXuancheng Zhou [aut]",
  "Maintainer": "Wei Liu <LiuWeideng@gmail.com>",
  "Description": "Covariate-augumented generalized factor model is designed\nto account for cross-modal heterogeneity, capture nonlinear\ndependencies among the data, incorporate additional\ninformation, and provide excellent interpretability while\nmaintaining high computational efficiency.",
  "BugReports": "https://github.com/feiyoung/CMGFM/issues",
  "License": "GPL-3",
  "VignetteBuilder": "knitr",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.1",
  "Repository": "https://feiyoung.r-universe.dev",
  "Date/Publication": "2024-06-24 00:59:07 UTC",
  "RemoteUrl": "https://github.com/feiyoung/cmgfm",
  "RemoteRef": "HEAD",
  "RemoteSha": "874b4c8adc824e65e4eed04557acde2ac74942b3",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-16 06:33:15 UTC",
    "User": "root"
  },
  "_user": "feiyoung",
  "_type": "src",
  "_file": "CMGFM_1.1.tar.gz",
  "_fileid": "https://r2.ropensci.org/d6b1e3175f972f704c04a7b324d89e509aece7d53a9876c5ff55f160b88b01c9",
  "_filesize": 290627,
  "_sha256": "d6b1e3175f972f704c04a7b324d89e509aece7d53a9876c5ff55f160b88b01c9",
  "_expires": "2026-10-24T06:39:53.000Z",
  "_created": "2026-07-16T06:33:15.000Z",
  "_published": "2026-07-16T06:39:58.116Z",
  "_jobs": [
    {
      "job": 87552273465,
      "time": 208,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8367021632"
    },
    {
      "job": 87552273479,
      "time": 155,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8367004666"
    },
    {
      "job": 87552273478,
      "time": 191,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8367016404"
    },
    {
      "job": 87552273481,
      "time": 161,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8367006315"
    },
    {
      "job": 87552273461,
      "time": 150,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8367003059"
    },
    {
      "job": 87552273475,
      "time": 218,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8367024892"
    },
    {
      "job": 87552273477,
      "time": 105,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8366989821"
    },
    {
      "job": 87552273457,
      "time": 347,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8367064167"
    },
    {
      "job": 87551698235,
      "time": 222,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8366957668"
    },
    {
      "job": 87552273425,
      "time": 113,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8366992009"
    },
    {
      "job": 87552273453,
      "time": 123,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8366994814"
    },
    {
      "job": 87552273443,
      "time": 139,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8366999964"
    },
    {
      "job": 87552273462,
      "time": 112,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8366991889"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228",
  "_status": "success",
  "_upstream": "https://github.com/feiyoung/cmgfm",
  "_commit": {
    "id": "874b4c8adc824e65e4eed04557acde2ac74942b3",
    "author": "feiyoung <1029725413@qq.com>",
    "committer": "feiyoung <1029725413@qq.com>",
    "message": "'update'\n",
    "time": 1719190747
  },
  "_maintainer": {
    "name": "Wei Liu",
    "email": "liuweideng@gmail.com"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "irlba",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "GFM",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.10",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "feiyoung",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "feiyoung",
      "count": 3,
      "uuid": 11505493
    }
  ],
  "_userbio": {
    "uuid": 11505493,
    "type": "user",
    "name": "Wei Liu",
    "followers": 29,
    "description": "Stastistics"
  },
  "_downloads": {
    "count": 410,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CMGFM"
  },
  "_devurl": "https://github.com/feiyoung/cmgfm",
  "_searchresults": 0,
  "_topics": [
    "openblas",
    "cpp",
    "openmp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/CMGFM.html",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/feiyoung/cmgfm",
  "_realowner": "feiyoung",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.1",
      "date": "2024-06-25"
    }
  ],
  "_exports": [
    "CMGFM",
    "gendata_cmgfm",
    "MSVR"
  ],
  "_help": [
    {
      "page": "CMGFM",
      "title": "Fit the CMGFM model",
      "topics": [
        "CMGFM"
      ]
    },
    {
      "page": "gendata_cmgfm",
      "title": "Generate simulated data",
      "topics": [
        "gendata_cmgfm"
      ]
    },
    {
      "page": "MSVR",
      "title": "Select the number of factors",
      "topics": [
        "MSVR"
      ]
    }
  ],
  "_readme": "https://github.com/feiyoung/cmgfm/raw/HEAD/README.md",
  "_rundeps": [
    "codetools",
    "doSNOW",
    "foreach",
    "GFM",
    "irlba",
    "iterators",
    "lattice",
    "MASS",
    "Matrix",
    "Rcpp",
    "RcppArmadillo",
    "snow"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_vignettes": [
    {
      "source": "simu.Rmd",
      "filename": "simu.html",
      "title": "CMGFM: simulation",
      "author": "Wei Liu",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Generate the simulated data",
        "Compare with other methods",
        "Visualize the comparison of performance",
        "Select the parameters"
      ],
      "created": "2024-06-23 02:33:23",
      "modified": "2024-06-24 00:59:07",
      "commits": 2
    }
  ],
  "_score": 3.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "cmgfm",
  "_universes": [
    "feiyoung"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1",
      "date": "2026-07-16T06:36:43.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/f6b9ea1d0393c1c97139216acdc3f193cc5c38d807be21fad26e9a00494eebce",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1",
      "date": "2026-07-16T06:35:35.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/536be3b214ee9f094d9ab0d614073c97f94f96e820cb56db1947a67754dc4166",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.1",
      "date": "2026-07-16T06:36:26.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/ed0f4460e52b11f9118af7da99a7ed9f2bdd9f76ed6bbd3ce98ee70c908d3fd7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.1",
      "date": "2026-07-16T06:35:41.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/44acb04ff0b686d5c3a656f548aaffaf9b50293ca943eb1648ea0fd7cac7a332",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1",
      "date": "2026-07-16T06:35:32.000Z",
      "arch": "aarch64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/b0b9a94754aee8fa0a021003efc963a538ade74af4971915f1f6932d02ad46f0",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1",
      "date": "2026-07-16T06:36:20.000Z",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/8c20a87aae10b50d7c5d42dfa261e450d0b2bb2dd417612f103a19d7e1898d10",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.1",
      "date": "2026-07-16T06:34:58.000Z",
      "arch": "aarch64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/64f7e74d37737b27355c2aa027451c5dfe1d39e7fcdbb7bf5726eacf9b58312f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.1",
      "date": "2026-07-16T06:37:12.000Z",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/fb6b337b2409a5ea9463f1b3eaad50dd9afff0c3dc55cbf5e35959d24c4020ab",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.1",
      "date": "2026-07-16T06:35:29.000Z",
      "arch": "emscripten",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/c7fb3dad05ad89c019888933379c82a32b19becff76a3429c67cbbd091098a3d",
      "status": "success",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1",
      "date": "2026-07-16T06:34:47.000Z",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/81fde6a079ec2f00c77b5717152a49411937a064bb0cffa29804a6ffab4a7c4e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1",
      "date": "2026-07-16T06:34:57.000Z",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/a4d298f1f9aa04bd1fd9b6038f3a65b8ade17e652868f3866f4e59d79b37fcf0",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.1",
      "date": "2026-07-16T06:34:35.000Z",
      "arch": "x86_64",
      "commit": "874b4c8adc824e65e4eed04557acde2ac74942b3",
      "fileid": "https://r2.ropensci.org/c0df7cc08fafa0361f925587d193696916ea0b82fdec4ce9d4f4b090eb2746f2",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/29476868228"
    }
  ]
}