{ "_id": "6a6318c6d3420cf5dfdb70f6", "Package": "MultiCOAP", "Type": "Package", "Title": "High-Dimensional Covariate-Augmented Overdispersed Multi-Study\nPoisson Factor Model", "Version": "1.1", "Date": "2024-03-06", "Authors@R": "c(person(given = \"Wei\",\nfamily = \"Liu\",\nrole = c(\"aut\", \"cre\"),\nemail = \"liuweideng@gmail.com\"),\nperson(given = \"Qingzhi\",\nfamily = \"Zhong\",\nrole = c(\"aut\")))", "Author": "Wei Liu [aut, cre], Qingzhi Zhong [aut]", "Maintainer": "Wei Liu ", "Description": "We introduce factor models designed to jointly analyze\nhigh-dimensional count data from multiple studies by extracting\nstudy-shared and specified factors. Our factor models account\nfor heterogeneous noises and overdispersion among counts with\naugmented covariates. We propose an efficient and speedy\nvariational estimation procedure for estimating model\nparameters, along with a novel criterion for selecting the\noptimal number of factors and the rank of regression\ncoefficient matrix. More details can be referred to Liu et al.\n(2024) .", "License": "GPL-3", "URL": "https://github.com/feiyoung/MultiCOAP", "BugReports": "https://github.com/feiyoung/MultiCOAP/issues", "Encoding": "UTF-8", "RoxygenNote": "7.1.2", "Repository": "https://feiyoung.r-universe.dev", "Date/Publication": "2024-10-26 11:53:45 UTC", "RemoteUrl": "https://github.com/feiyoung/multicoap", "RemoteRef": "HEAD", "RemoteSha": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-07-24 06:40:50 UTC", "User": "root" }, "_user": "feiyoung", "_type": "src", "_file": "MultiCOAP_1.1.tar.gz", "_fileid": "https://r2.ropensci.org/3512bb8acf79978471d9b50ea329f32b171193efd9482996d1636f6289575e7a", "_filesize": 268092, "_sha256": "3512bb8acf79978471d9b50ea329f32b171193efd9482996d1636f6289575e7a", "_expires": "2026-11-01T07:48:20.000Z", "_created": "2026-07-24T06:40:50.000Z", "_published": "2026-07-24T07:48:22.376Z", "_jobs": [ { "job": 89417683931, "time": 128, "config": "linux-devel-arm64", "r": "4.7.0", "check": "WARNING", "artifact": "8588771092" }, { "job": 89417683903, "time": 194, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "8588791519" }, { "job": 89417683940, "time": 129, "config": "linux-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "8588770679" }, { "job": 89417683942, "time": 150, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "8588777433" }, { "job": 89417683872, "time": 149, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "8589949412" }, { "job": 89417683951, "time": 385, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "8590117456" }, { "job": 89417683897, "time": 111, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "8589965715" }, { "job": 89417683909, "time": 244, "config": "macos-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "8589901849" }, { "job": 89417196132, "time": 193, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8588728548" }, { "job": 89417683844, "time": 103, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8588762988" }, { "job": 89417683972, "time": 138, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "8588774451" }, { "job": 89417683919, "time": 130, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "8588772336" }, { "job": 89417683884, "time": 115, "config": "windows-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "8588767092" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172", "_status": "success", "_upstream": "https://github.com/feiyoung/multicoap", "_commit": { "id": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "author": "Wei Liu <1029725413@qq.com>", "committer": "GitHub ", "message": "Add files via upload", "time": 1729943625 }, "_maintainer": { "name": "Wei Liu", "email": "liuweideng@gmail.com" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "irlba", "role": "Depends" }, { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "MASS", "role": "Imports" }, { "package": "Rcpp", "version": ">= 1.0.10", "role": "Imports" } ], "_owner": "feiyoung", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "feiyoung", "count": 5, "uuid": 11505493 } ], "_userbio": { "uuid": 11505493, "type": "user", "name": "Wei Liu", "followers": 29, "description": "Stastistics" }, "_downloads": { "count": 205, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MultiCOAP" }, "_devurl": "https://github.com/feiyoung/multicoap", "_searchresults": 3, "_topics": [ "openblas", "cpp", "openmp" ], "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/MultiCOAP.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/feiyoung/multicoap", "_realowner": "feiyoung", "_cranurl": true, "_releases": [ { "version": "1.1", "date": "2024-03-07" } ], "_exports": [ "gendata_simu_multi2", "MSFRVI", "MultiCOAP" ], "_help": [ { "page": "gendata_simu_multi2", "title": "Generate simulated data", "topics": [ "gendata_simu_multi2" ] }, { "page": "MSFRVI", "title": "Fit the multi-study covariate-augmented linear factor model via variational inference", "topics": [ "MSFRVI" ] }, { "page": "MultiCOAP", "title": "Fit the multi-study covariate-augmented overdispersed Poisson factor model via variational inference", "topics": [ "MultiCOAP" ] } ], "_readme": "https://github.com/feiyoung/multicoap/raw/HEAD/README.md", "_rundeps": [ "irlba", "lattice", "MASS", "Matrix", "Rcpp", "RcppArmadillo" ], "_sysdeps": [ { "shlib": "liblapack", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libblas", "package": "libopenblas0-pthread", "source": "openblas", "version": "0.3.32+ds-5", "name": "openblas", "homepage": "https://www.openblas.net/", "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" }, { "shlib": "libgomp", "package": "libgomp1", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "openmp", "homepage": "http://gcc.gnu.org/", "description": "GCC OpenMP (GOMP) support library" } ], "_score": 3.1760912590556813, "_indexed": true, "_nocasepkg": "multicoap", "_universes": [ "feiyoung" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1", "date": "2026-07-24T06:43:02.000Z", "distro": "resolute", "arch": "aarch64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/47a44da32e11ef89bad44ca12c3b36c0e735561ba3acef90c0d308643dc41105", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.7.0", "os": "linux", "version": "1.1", "date": "2026-07-24T06:44:08.000Z", "distro": "resolute", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/038157ab658ac3d4952a7d461efd362def204a16a530b22d8c8d92dfdb64075c", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.1", "os": "linux", "version": "1.1", "date": "2026-07-24T06:43:01.000Z", "distro": "resolute", "arch": "aarch64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/ca7c3e11df4166a8c619b365a512fdf34d75096a287e7c14f80c7eea25c19cca", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.1", "os": "linux", "version": "1.1", "date": "2026-07-24T06:43:13.000Z", "distro": "resolute", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/0622b8a312fe8ad920f98e58ae0625c079ae6a7b060a7761e598a7722b948276", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.5.3", "os": "mac", "version": "1.1", "date": "2026-07-24T07:39:17.000Z", "arch": "aarch64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/6f6f6f5fdaf8712804bf2f5b87a189ba83e591ab355b9676e6f57bdf6669419a", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.5.3", "os": "mac", "version": "1.1", "date": "2026-07-24T07:45:39.000Z", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/5128e99df3f693e8aa4140745b0fc5cf5a0a91dc5828c4b980bb0c9aeb272b2c", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.1", "os": "mac", "version": "1.1", "date": "2026-07-24T07:40:20.000Z", "arch": "aarch64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/8e2cb2713aaf0a74dd8442ebd6a836b150336e86cd75afacc0aa0ca88ba45beb", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.1", "os": "mac", "version": "1.1", "date": "2026-07-24T07:36:55.000Z", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/469d58da64766021a3cbe9c7410b588dfc74f4be7508f668edd44b289254bc43", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.0", "os": "wasm", "version": "1.1", "date": "2026-07-24T06:43:01.000Z", "arch": "emscripten", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/7084bf622f315524f0b78855cb1611f09a080dead238f52ea25918d553387b18", "status": "success", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.7.0", "os": "win", "version": "1.1", "date": "2026-07-24T06:42:32.000Z", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/5744b1a4054b9f680484f0dca6d68f961a4e1546bc6e371242f3ab4780cf91a1", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.5.3", "os": "win", "version": "1.1", "date": "2026-07-24T06:42:30.000Z", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/987149b54161e34495709a1b460113385f36e20dd0b53ebc20f019cf797d0e8e", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" }, { "r": "4.6.1", "os": "win", "version": "1.1", "date": "2026-07-24T06:42:10.000Z", "arch": "x86_64", "commit": "0acf705cc5106beacc599af6ac9bacfe95ef852a", "fileid": "https://r2.ropensci.org/e93f66d69d374ca94f1236b430f9d0b055686852d25550d09c052590457949a3", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/feiyoung/actions/runs/30072845172" } ] }