Package: MultiCOAP 1.1

Wei Liu

MultiCOAP: High-Dimensional Covariate-Augmented Overdispersed Multi-Study Poisson Factor Model

We introduce factor models designed to jointly analyze high-dimensional count data from multiple studies by extracting study-shared and specified factors. Our factor models account for heterogeneous noises and overdispersion among counts with augmented covariates. We propose an efficient and speedy variational estimation procedure for estimating model parameters, along with a novel criterion for selecting the optimal number of factors and the rank of regression coefficient matrix. More details can be referred to Liu et al. (2024) <doi:10.48550/arXiv.2402.15071>.

Authors:Wei Liu [aut, cre], Qingzhi Zhong [aut]

MultiCOAP_1.1.tar.gz
MultiCOAP_1.1.zip(r-4.7)MultiCOAP_1.1.zip(r-4.6)MultiCOAP_1.1.zip(r-4.5)
MultiCOAP_1.1.tgz(r-4.6-x86_64)MultiCOAP_1.1.tgz(r-4.6-arm64)MultiCOAP_1.1.tgz(r-4.5-x86_64)MultiCOAP_1.1.tgz(r-4.5-arm64)
MultiCOAP_1.1.tar.gz(r-4.7-arm64)MultiCOAP_1.1.tar.gz(r-4.7-x86_64)MultiCOAP_1.1.tar.gz(r-4.6-arm64)MultiCOAP_1.1.tar.gz(r-4.6-x86_64)
MultiCOAP_1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
MultiCOAP/json (API)

# Install 'MultiCOAP' in R:
install.packages('MultiCOAP', repos = c('https://feiyoung.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/feiyoung/multicoap/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

openblascppopenmp

3.18 score 1 packages 3 scripts 161 downloads 3 exports 6 dependencies

Last updated from:0acf705cc5. Checks:11 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING140
linux-devel-x86_64WARNING142
source / vignettesOK192
linux-release-arm64WARNING147
linux-release-x86_64WARNING143
macos-release-arm64WARNING132
macos-release-x86_64WARNING202
macos-oldrel-arm64WARNING106
macos-oldrel-x86_64WARNING248
windows-develWARNING152
windows-releaseWARNING163
windows-oldrelWARNING141
wasm-releaseOK108

Exports:gendata_simu_multi2MSFRVIMultiCOAP

Dependencies:irlbalatticeMASSMatrixRcppRcppArmadillo