Package: MultiCOAP 1.1

Wei Liu

MultiCOAP: High-Dimensional Covariate-Augmented Overdispersed Multi-Study Poisson Factor Model

We introduce factor models designed to jointly analyze high-dimensional count data from multiple studies by extracting study-shared and specified factors. Our factor models account for heterogeneous noises and overdispersion among counts with augmented covariates. We propose an efficient and speedy variational estimation procedure for estimating model parameters, along with a novel criterion for selecting the optimal number of factors and the rank of regression coefficient matrix. More details can be referred to Liu et al. (2024) <doi:10.48550/arXiv.2402.15071>.

Authors:Wei Liu [aut, cre], Qingzhi Zhong [aut]

MultiCOAP_1.1.tar.gz
MultiCOAP_1.1.zip(r-4.7-x86_64)MultiCOAP_1.1.zip(r-4.7-arm64)MultiCOAP_1.1.zip(r-4.6-x86_64)MultiCOAP_1.1.zip(r-4.6-arm64)MultiCOAP_1.1.zip(r-4.5-x86_64)
MultiCOAP_1.1.tgz(r-4.6-x86_64)MultiCOAP_1.1.tgz(r-4.6-arm64)MultiCOAP_1.1.tgz(r-4.5-x86_64)MultiCOAP_1.1.tgz(r-4.5-arm64)
MultiCOAP_1.1.tar.gz(r-4.7-arm64)MultiCOAP_1.1.tar.gz(r-4.7-x86_64)MultiCOAP_1.1.tar.gz(r-4.6-arm64)MultiCOAP_1.1.tar.gz(r-4.6-x86_64)
MultiCOAP_1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
MultiCOAP/json (API)

# Install 'MultiCOAP' in R:
install.packages('MultiCOAP', repos = c('https://feiyoung.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/feiyoung/multicoap/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

openblascppopenmp

3.18 score 1 packages 3 scripts 341 downloads 3 exports 6 dependencies

Last updated from:0acf705cc5. Checks:13 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING104
linux-devel-x86_64WARNING147
source / vignettesOK170
linux-release-arm64WARNING104
linux-release-x86_64WARNING120
macos-release-arm64WARNING140
macos-release-x86_64WARNING278
macos-oldrel-arm64WARNING126
macos-oldrel-x86_64WARNING304
windows-devel-arm64WARNING200
windows-devel-x86_64WARNING177
windows-release-arm64WARNING192
windows-release-x86_64WARNING114
windows-oldrel-x86_64WARNING123
wasm-releaseOK91

Exports:gendata_simu_multi2MSFRVIMultiCOAP

Dependencies:irlbalatticeMASSMatrixRcppRcppArmadillo